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1

Bacteriorhodopsin: Structural Insights Revealed Using X-Ray Lasers and Synchrotron Radiation

Wickstrand, Cecilia, Nogly, Przemyslaw, Nango, Eriko, Iwata, So, Standfuss, Jörg, Neutze, Richard

Journal:

Annual Review of Biochemistry

Année:

2019

Langue:

english

Fichier:

PDF, 5.24 MB

english, 2019

2

A three-dimensional movie of structural changes in bacteriorhodopsin

Nango, Eriko, Royant, Antoine, Kubo, Minoru, Nakane, Takanori, Wickstrand, Cecilia, Kimura, Tetsunari, Tanaka, Tomoyuki, Tono, Kensuke, Song, Changyong, Tanaka, Rie, Arima, Toshi, Yamashita, Ayumi, Ko

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2016

3

Crystal structure of 3-isopropylmalate dehydrogenase in complex with NAD+ and a designed inhibitor

Eriko Nango, Takashi Yamamoto, Takashi Kumasaka, Tadashi Eguchi

Journal:

Bioorganic & Medicinal Chemistry

Année:

2009

Langue:

english

Fichier:

PDF, 518 KB

english, 2009

4

An expeditious chemo-enzymatic route from glucose to catechol by the use of 2-deoxy-scyllo-inosose synthase

Katsumi Kakinuma, Eriko Nango, Fumitaka Kudo, Yoshitaka Matsushima, Tadashi Eguchi

Journal:

Tetrahedron Letters

Année:

2000

Langue:

english

Fichier:

PDF, 105 KB

english, 2000

5

Structure of 2-deoxy-scyllo-inosose synthase, a key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics, in complex with a mechanism-based inhibitor and NAD+

Eriko Nango, Takashi Kumasaka, Toshifumi Hirayama, Nobuo Tanaka, Tadashi Eguchi

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 626 KB

english, 2008

6

Roles of a 20 kDa Protein Associated with a Carbocycle-Forming Enzyme Involved in Aminoglycoside Biosynthesis in Primary and Secondary Metabolism

TAMEGAI, Hideyuki, SAWADA, Hiroshi, NANGO, Eriko, AOKI, Rie, HIRAKAWA, Haruka, IINO, Teruhiko, EGUCHI, Tadashi

Journal:

Bioscience Biotechnology and Biochemistry

Année:

2010

Langue:

english

Fichier:

PDF, 110 KB

english, 2010

7

Active Site Mapping of 2-Deoxy- scyllo -inosose Synthase, the Key Starter Enzyme for the Biosynthesis of 2-Deoxystreptamine. Mechanism-Based Inhibition and Identification of Lysine-141 as the Entrapped Nucleophile §

Nango, Eriko, Eguchi, Tadashi, Kakinuma, Katsumi

Journal:

Journal of Organic Chemistry

Année:

2004

Langue:

english

Fichier:

PDF, 185 KB

english, 2004

8

Significance of the 20-kDa Subunit of Heterodimeric 2-Deoxy- scyllo -inosose Synthase for the Biosynthesis of Butirosin Antibiotics in Bacillus circulans

TAMEGAI, Hideyuki, NANGO, Eriko, KOIKE-TAKESHITA, Ayumi, KUDO, Fumitaka, KAKINUMA, Katsumi

Journal:

Bioscience Biotechnology and Biochemistry

Année:

2002

Langue:

english

Fichier:

PDF, 612 KB

english, 2002

9

Grease matrix as a versatile carrier of proteins for serial crystallography

Sugahara, Michihiro, Mizohata, Eiichi, Nango, Eriko, Suzuki, Mamoru, Tanaka, Tomoyuki, Masuda, Tetsuya, Tanaka, Rie, Shimamura, Tatsuro, Tanaka, Yoshiki, Suno, Chiyo, Ihara, Kentaro, Pan, Dongqing, Ka

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 661 KB

english, 2014

10

Diverse application platform for hard X-ray diffraction in SACLA (DAPHNIS): application to serial protein crystallography using an X-ray free-electron laser

Tono, Kensuke, Nango, Eriko, Sugahara, Michihiro, Song, Changyong, Park, Jaehyun, Tanaka, Tomoyuki, Tanaka, Rie, Joti, Yasumasa, Kameshima, Takashi, Ono, Shun, Hatsui, Takaki, Mizohata, Eiichi, Suzuki

Journal:

Journal of Synchrotron Radiation

Année:

2015

Langue:

english

Fichier:

PDF, 705 KB

english, 2015

11

Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography

Fukuda, Yohta, Tse, Ka Man, Nakane, Takanori, Nakatsu, Toru, Suzuki, Mamoru, Sugahara, Michihiro, Inoue, Shigeyuki, Masuda, Tetsuya, Yumoto, Fumiaki, Matsugaki, Naohiro, Nango, Eriko, Tono, Kensuke, J

Journal:

Proceedings of the National Academy of Sciences

Année:

2016

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2016

12

Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography

Fukuda, Yohta, Tse, Ka Man, Suzuki, Mamoru, Diederichs, Kay, Hirata, Kunio, Nakane, Takanori, Sugahara, Michihiro, Nango, Eriko, Tono, Kensuke, Joti, Yasumasa, Kameshima, Takashi, Song, Changyong, Hat

Journal:

Journal of Biochemistry

Année:

2016

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2016

13

Microcrystal delivery by pulsed liquid droplet for serial femtosecond crystallography

Mafuné, Fumitaka, Miyajima, Ken, Tono, Kensuke, Takeda, Yoshihiro, Kohno, Jun-ya, Miyauchi, Naoya, Kobayashi, Jun, Joti, Yasumasa, Nango, Eriko, Iwata, So, Yabashi, Makina

Journal:

Acta Crystallographica Section D Structural Biology

Année:

2016

Langue:

english

Fichier:

PDF, 554 KB

english, 2016

14

Data processing pipeline for serial femtosecond crystallography at SACLA

Nakane, Takanori, Joti, Yasumasa, Tono, Kensuke, Yabashi, Makina, Nango, Eriko, Iwata, So, Ishitani, Ryuichiro, Nureki, Osamu

Journal:

Journal of Applied Crystallography

Année:

2016

Langue:

english

Fichier:

PDF, 789 KB

english, 2016

15

Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent

Nakane, Takanori, Hanashima, Shinya, Suzuki, Mamoru, Saiki, Haruka, Hayashi, Taichi, Kakinouchi, Keisuke, Sugiyama, Shigeru, Kawatake, Satoshi, Matsuoka, Shigeru, Matsumori, Nobuaki, Nango, Eriko, Kob

Journal:

Proceedings of the National Academy of Sciences

Année:

2016

Langue:

english

Fichier:

PDF, 931 KB

english, 2016

16

Taste substance binding elicits conformational change of taste receptor T1r heterodimer extracellular domains

Nango, Eriko, Akiyama, Shuji, Maki-Yonekura, Saori, Ashikawa, Yuji, Kusakabe, Yuko, Krayukhina, Elena, Maruno, Takahiro, Uchiyama, Susumu, Nuemket, Nipawan, Yonekura, Koji, Shimizu, Madoka, Atsumi, Na

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2016

17

Identification of L-Glutamine: 2-Deoxy-scyllo-inosose Aminotransferase Required for the Biosynthesis of Butirosin in Bacillus circulans.

TAMEGAI, HIDEYUKI, NANGO, ERIKO, KUWAHARA, MIEKO, YAMAMOTO, HIDEKI, OTA, YASUMASA, KURIKI, HISAKO, EGUCHI, TADASHI, KAKINUMA, KATSUMI

Journal:

The Journal of Antibiotics

Année:

2002

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2002

18

Structural basis for perception of diverse chemical substances by T1r taste receptors

Nuemket, Nipawan, Yasui, Norihisa, Kusakabe, Yuko, Nomura, Yukiyo, Atsumi, Nanako, Akiyama, Shuji, Nango, Eriko, Kato, Yukinari, Kaneko, Mika K., Takagi, Junichi, Hosotani, Maiko, Yamashita, Atsuko

Journal:

Nature Communications

Année:

2017

Langue:

english

Fichier:

PDF, 1.58 MB

english, 2017

19

Oil-free hyaluronic acid matrix for serial femtosecond crystallography

Sugahara, Michihiro, Song, Changyong, Suzuki, Mamoru, Masuda, Tetsuya, Inoue, Shigeyuki, Nakane, Takanori, Yumoto, Fumiaki, Nango, Eriko, Tanaka, Rie, Tono, Kensuke, Joti, Yasumasa, Kameshima, Takashi

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 613 KB

english, 2016

20

Atomic resolution structure of serine protease proteinase K at ambient temperature

Masuda, Tetsuya, Suzuki, Mamoru, Inoue, Shigeyuki, Song, Changyong, Nakane, Takanori, Nango, Eriko, Tanaka, Rie, Tono, Kensuke, Joti, Yasumasa, Kameshima, Takashi, Hatsui, Takaki, Yabashi, Makina, Mik

Journal:

Scientific Reports

Année:

2017

Langue:

english

Fichier:

PDF, 1.37 MB

english, 2017

21

Serial femtosecond crystallography structure of cytochrome c oxidase at room temperature

Andersson, Rebecka, Safari, Cecilia, Dods, Robert, Nango, Eriko, Tanaka, Rie, Yamashita, Ayumi, Nakane, Takanori, Tono, Kensuke, Joti, Yasumasa, Båth, Petra, Dunevall, Elin, Bosman, Robert, Nureki, Os

Journal:

Scientific Reports

Année:

2017

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2017

22

A large-scale expression strategy for multimeric extracellular protein complexes using Drosophila S2 cells and its application to the recombinant expression of heterodimeric ligand-binding domains of taste receptor

Yamashita, Atsuko, Nango, Eriko, Ahikawa, Yuji

Journal:

Protein Science

Année:

2017

Langue:

english

Fichier:

PDF, 1.74 MB

english, 2017

23

Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability

Gorel, Alexander, Motomura, Koji, Fukuzawa, Hironobu, Doak, R. Bruce, Grünbein, Marie Luise, Hilpert, Mario, Inoue, Ichiro, Kloos, Marco, Kovácsová, Gabriela, Nango, Eriko, Nass, Karol, Roome, Christo

Journal:

Nature Communications

Année:

2017

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2017

24

Serial femtosecond crystallography at the SACLA: breakthrough to dynamic structural biology

Mizohata, Eiichi, Nakane, Takanori, Fukuda, Yohta, Nango, Eriko, Iwata, So

Journal:

Biophysical Reviews

Année:

2017

Langue:

english

Fichier:

PDF, 1.12 MB

english, 2017

25

Two-colour serial femtosecond crystallography dataset from gadoteridol-derivatized lysozyme for MAD phasing

Gorel, Alexander, Motomura, Koji, Fukuzawa, Hironobu, Doak, R. Bruce, Grünbein, Marie Luise, Hilpert, Mario, Inoue, Ichiro, Kloos, Marco, Nass Kovács, Gabriela, Nango, Eriko, Nass, Karol, Roome, Chris

Journal:

Scientific Data

Année:

2017

Langue:

english

Fichier:

PDF, 227 KB

english, 2017

26

Time Resolved Crystallography Using X-ray Free Electron Laser on Photoreactive Membrane Proteins

IWATA, So, NANGO, Eriko

Journal:

Seibutsu Butsuri

Année:

2018

Fichier:

PDF, 935 KB

2018

27

A molecular movie of structural changes in bacteriorhodopsin

Nango, Eriko, Iwata, So

Journal:

Acta Crystallographica Section A Foundations and Advances

Année:

2017

Langue:

english

Fichier:

PDF, 113 KB

english, 2017

28

Native sulfur/chlorine SAD phasing for serial femtosecond crystallography

Nakane, Takanori, Song, Changyong, Suzuki, Mamoru, Nango, Eriko, Kobayashi, Jun, Masuda, Tetsuya, Inoue, Shigeyuki, Mizohata, Eiichi, Nakatsu, Toru, Tanaka, Tomoyuki, Tanaka, Rie, Shimamura, Tatsuro,

Journal:

Acta Crystallographica Section D Biological Crystallography

Année:

2015

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2015

29

Nanosecond pump–probe device for time-resolved serial femtosecond crystallography developed at SACLA

Kubo, Minoru, Nango, Eriko, Tono, Kensuke, Kimura, Tetsunari, Owada, Shigeki, Song, Changyong, Mafuné, Fumitaka, Miyajima, Ken, Takeda, Yoshihiro, Kohno, Jun-ya, Miyauchi, Naoya, Nakane, Takanori, Tan

Journal:

Journal of Synchrotron Radiation

Année:

2017

Langue:

english

Fichier:

PDF, 639 KB

english, 2017

30

Improving High Viscosity Extrusion of Microcrystals for Time-resolved Serial Femtosecond Crystallography at X-ray Lasers

James, Daniel, Weinert, Tobias, Skopintsev, Petr, Furrer, Antonia, Gashi, Dardan, Tanaka, Tomoyuki, Nango, Eriko, Nogly, Przemyslaw, Standfuss, Joerg

Journal:

Journal of Visualized Experiments

Année:

2019

Langue:

english

Fichier:

PDF, 2.09 MB

english, 2019

31

Time-resolved serial femtosecond crystallography studies at an X-ray free electron laser reveals structural changes in bacteriorhodopsin

Neutze, Richard, Nango, Eriko, Tanaka, Tomoyuki, Nakane, Takanori, Iwata, So, Royant, Antoine, Standfuss, Jörg, Nogly, Przemyslaw, Wickstrand, Cecilia

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

2018

Langue:

english

Fichier:

PDF, 51 KB

english, 2018

32

Pump-Probe Time-Resolved Serial Femtosecond Crystallography at SACLA: Current Status and Data Collection Strategies

Nango, Eriko, Kubo, Minoru, Tono, Kensuke, Iwata, So

Journal:

Applied Sciences

Année:

2019

Langue:

english

Fichier:

PDF, 1.66 MB

english, 2019

33

A tool for visualizing protein motions in time-resolved crystallography

Wickstrand, Cecilia, Katona, Gergely, Nakane, Takanori, Nogly, Przemyslaw, Standfuss, Joerg, Nango, Eriko, Neutze, Richard

Journal:

Structural Dynamics

Année:

2020

Fichier:

PDF, 4.27 MB

2020